STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_01464CRAL-TRIO domain-containing protein T23G5.2. (270 aa)    
Predicted Functional Partners:
BWQ96_05483
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.721
BWQ96_00151
Cell division control protein 42-like.
    
 0.703
BWQ96_04979
APH domain-containing protein.
    
  0.679
BWQ96_05454
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.654
BWQ96_03420
AP-1 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
     
 0.629
BWQ96_08249
AP-1 complex subunit gamma-2.
    
 0.581
BWQ96_08250
AP-1 complex subunit gamma.
    
 0.581
BWQ96_08859
Hydroxysteroid dehydrogenase-like protein 2.
    
 0.547
BWQ96_09026
Ras-related protein Rab-11A.
    
 0.546
BWQ96_09027
Ras-related protein Rab-11B.
    
 0.546
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.