STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_02032Vacuolar protein-sorting-associated protein 25. (177 aa)    
Predicted Functional Partners:
BWQ96_07342
Vacuolar protein-sorting-associated protein 36.
   
 0.998
BWQ96_06071
Vacuolar-sorting protein SNF8.
   
 0.998
BWQ96_04968
Charged multivesicular body protein 6.
   
 0.995
BWQ96_04789
Vacuolar protein sorting-associated protein 28-like; Belongs to the VPS28 family.
   
 0.981
BWQ96_02499
Vacuolar protein sorting-associated protein 37A.
    
 0.880
BWQ96_07465
Charged multivesicular body protein 7.
    
 0.808
BWQ96_06694
Charged multivesicular body protein 2a-like.
   
 0.794
BWQ96_06692
Charged multivesicular body protein 2a-like.
   
 0.794
BWQ96_05155
Protein ELC.
   
 0.757
BWQ96_04834
Protein ELC-like.
   
 0.757
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.