STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_00964Calmodulin; Belongs to the calmodulin family. (150 aa)    
Predicted Functional Partners:
BWQ96_06422
Two pore calcium channel protein 1.
    
 0.839
BWQ96_03526
Uncharacterized protein.
   
 0.838
BWQ96_01954
Protein lap1.
    
 0.818
BWQ96_06623
Cytoplasmic dynein 1 heavy chain 1.
   
 0.793
BWQ96_07085
DNA repair protein RAD4.
    
 0.763
BWQ96_08976
Peroxisomal NADH pyrophosphatase NUDT12.
    
 0.760
BWQ96_06838
Putative myosin light chain kinase; Belongs to the protein kinase superfamily.
   
 0.744
BWQ96_06117
Uncharacterized protein.
    
 0.696
BWQ96_01176
Potassium voltage-gated channel subfamily KQT member 4.
    
 0.696
BWQ96_02080
Germinal-center associated nuclear protein.
    
 
 0.682
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.