STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_01383Nuclear pore complex protein Nup98-Nup96. (932 aa)    
Predicted Functional Partners:
BWQ96_03624
Ran-specific GTPase-activating protein.
   
 0.998
BWQ96_07894
Protein transport protein SEC13-like; Belongs to the WD repeat SEC13 family.
    
 0.905
BWQ96_09056
Protein RAE1.
    
 0.859
BWQ96_00307
Nucleoporin GLE2.
    
 0.859
BWQ96_04728
Uncharacterized protein.
   
 0.832
BWQ96_06380
Nuclear pore glycoprotein p62.
   
 0.829
BWQ96_07731
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.828
BWQ96_00555
Nucleoporin nup44.
   
 0.826
BWQ96_06529
Uncharacterized protein.
   
 0.825
BWQ96_09205
Nuclear pore complex protein Nup98-Nup96.
  
  
 
0.760
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.