STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_010182-carboxy-1,4-naphthoquinone phytyltransferase. (341 aa)    
Predicted Functional Partners:
BWQ96_00441
Geranylgeranyl diphosphate reductase, chloroplastic.
    
 0.804
BWQ96_09441
Geranylgeranyl pyrophosphate synthase, chloroplastic; Belongs to the FPP/GGPP synthase family.
    
 0.774
BWQ96_09212
Solanesyl-diphosphate synthase 1, mitochondrial; Belongs to the FPP/GGPP synthase family.
    
 0.774
BWQ96_00211
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.774
BWQ96_06409
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.762
BWQ96_03594
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
     
 0.758
BWQ96_03089
Putative homogentisate phytyltransferase 1, chloroplastic.
     
 0.758
BWQ96_04413
Putative NADH dehydrogenase.
    
 0.701
BWQ96_00300
Pyr_redox_2 domain-containing protein.
    
 0.701
BWQ96_01445
Isopentenyl-diphosphate Delta-isomerase 1.
    
 0.695
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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