STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_00893Uncharacterized protein. (549 aa)    
Predicted Functional Partners:
BWQ96_07597
1,4-alpha-glucan-branching enzyme.
 
 
 0.798
BWQ96_09042
Glycogen debranching enzyme.
  
 0.674
BWQ96_07644
5'-AMP-activated protein kinase subunit beta-1.
    
 0.668
BWQ96_02898
Phosphoglucan phosphatase LSF1, chloroplastic.
    
 0.668
BWQ96_02528
Phosphoglucan phosphatase DSP4, chloroplastic.
    
 0.668
BWQ96_07981
Putative glucuronosyltransferase PGSIP8.
   
 0.667
BWQ96_05601
Putative glucuronosyltransferase PGSIP8.
   
 0.667
BWQ96_07779
Isoamylase 3, chloroplastic.
   
 0.665
BWQ96_05477
Isoamylase 3, chloroplastic.
   
 0.665
BWQ96_04504
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.665
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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