STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_01230Uncharacterized protein. (227 aa)    
Predicted Functional Partners:
BWQ96_04068
t-SNARE coiled-coil homology domain-containing protein.
    
 0.925
BWQ96_00216
Uncharacterized protein; Belongs to the synaptobrevin family.
  
  
 
0.824
BWQ96_07166
Vacuolar protein-sorting-associated protein 33-like; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.817
BWQ96_07432
Vesicle transport v-SNARE 13.
    
 0.779
BWQ96_04884
Uncharacterized protein; Belongs to the VPS16 family.
    
 
 0.764
BWQ96_09490
Syntaxin-2.
    
 0.748
BWQ96_01825
Syntaxin-1A-like; Belongs to the syntaxin family.
    
 0.748
BWQ96_02815
Syntaxin-41; Belongs to the syntaxin family.
    
 0.711
BWQ96_06379
Alpha-soluble NSF attachment protein.
    
 0.609
BWQ96_03904
Arf-GAP domain and FG repeat-containing protein 2.
    
 0.609
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.