STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_00933WD repeat-containing protein 26. (556 aa)    
Predicted Functional Partners:
BWQ96_08214
Ran-binding protein 9.
   
 
 0.969
BWQ96_00251
E3 ubiquitin-protein ligase UPL3.
   
  
 0.926
BWQ96_08635
Protein RMD5-like.
   
 
 0.913
BWQ96_00105
Armadillo repeat-containing protein 8.
    
 
 0.901
BWQ96_05832
Glucose-induced degradation protein 8-like.
    
 
 0.818
BWQ96_05100
Glucose-induced degradation protein 8-like.
    
 
 0.818
BWQ96_00466
CTLH domain-containing protein.
    
 
 0.818
BWQ96_07898
Protein yippee-like; Belongs to the yippee family.
   
 
 0.759
BWQ96_02577
Protein yippee-like; Belongs to the yippee family.
   
 
 0.759
BWQ96_01569
Riboflavin synthase.
 
      0.731
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.