STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_00754mRNA-decapping enzyme-like protein. (727 aa)    
Predicted Functional Partners:
BWQ96_03264
mRNA decapping complex subunit 2.
    
 0.997
BWQ96_04183
DEAD-box ATP-dependent RNA helicase 8; Belongs to the DEAD box helicase family.
   
 0.985
BWQ96_02958
Varicose-related protein.
    
 0.985
BWQ96_10347
Pyridoxine/pyridoxamine 5'-phosphate oxidase.
    
 0.919
BWQ96_06930
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
    
 0.919
BWQ96_01347
NAD(P)H-hydrate epimerase.
    
 0.919
BWQ96_09711
Protein LSM14-like.
    
 
 0.916
BWQ96_07326
5'-3' exoribonuclease 1.
    
 0.913
BWQ96_03803
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
    
 0.913
BWQ96_00653
5'-3' exoribonuclease 1.
    
 0.913
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.