STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_01145Transcription regulatory protein SNF2. (1417 aa)    
Predicted Functional Partners:
BWQ96_09815
SWI/SNF complex component SNF12-like.
    
 0.869
BWQ96_02346
Histone H2A deubiquitinase MYSM1.
    
 0.837
BWQ96_00621
Armadillo repeat-containing protein LFR.
    
 0.827
BWQ96_04187
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
    
 0.822
BWQ96_02935
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A.
    
 0.822
BWQ96_06547
Actin-related protein 4; Belongs to the actin family.
    
 0.820
BWQ96_01254
Actin-related protein 4; Belongs to the actin family.
    
 0.820
BWQ96_02422
AT-rich interactive domain-containing protein 2.
    
 0.782
BWQ96_10343
SWI/SNF complex subunit SMARCC2.
    
 0.770
BWQ96_06672
SWI/SNF and RSC complexes subunit ssr2.
    
 0.770
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.