STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_00881Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2. (402 aa)    
Predicted Functional Partners:
BWQ96_00071
Protein phosphatase 1 regulatory subunit 7.
 
  
   0.874
BWQ96_08442
Phosphatidate phosphatase PAH2.
    
 0.772
BWQ96_10204
Mitochondrial import inner membrane translocase subunit tim23.
    
 0.733
BWQ96_00651
DNA-directed RNA polymerase II subunit RPB7.
    
 0.677
BWQ96_01760
General transcription factor IIF subunit 2.
    
 0.655
BWQ96_07595
Mitochondrial import inner membrane translocase subunit TIM22-2.
   
 0.639
BWQ96_07494
Mitochondrial import inner membrane translocase subunit TIM17-2.
   
 0.639
BWQ96_07464
DNA-directed RNA polymerase II subunit rpb11.
    
  0.615
BWQ96_10195
DNA-directed RNA polymerases II, IV and V subunit 3.
    
 0.610
BWQ96_03654
DNA-directed RNA polymerases I and III subunit rpac1.
    
 0.610
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.