STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_0009426S protease regulatory subunit 7-like; Belongs to the AAA ATPase family. (424 aa)    
Predicted Functional Partners:
BWQ96_09774
Proteasome subunit alpha type.
   
 0.999
BWQ96_08255
26S protease regulatory subunit 8-like; Belongs to the AAA ATPase family.
  
0.999
BWQ96_08246
26S protease regulatory subunit 6A-like; Belongs to the AAA ATPase family.
  
0.999
BWQ96_06533
26S proteasome non-ATPase regulatory subunit 13.
   
 0.999
BWQ96_05564
26S protease regulatory subunit 4-like; Belongs to the AAA ATPase family.
  
0.999
BWQ96_02441
26S proteasome non-ATPase regulatory subunit 7-like.
   
 0.999
BWQ96_01672
26S proteasome non-ATPase regulatory subunit 6-like.
   
 0.999
BWQ96_00832
26S proteasome non-ATPase regulatory subunit 12.
   
 0.999
BWQ96_10402
26S protease regulatory subunit 10B-like; Belongs to the AAA ATPase family.
  
0.998
BWQ96_08609
26S proteasome non-ATPase regulatory subunit 2.
   
 0.998
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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