STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_00706Eukaryotic translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (141 aa)    
Predicted Functional Partners:
BWQ96_07175
40S ribosomal protein S3-B; Belongs to the universal ribosomal protein uS3 family.
  
 0.998
BWQ96_06555
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.998
BWQ96_03640
40S ribosomal protein S20.
  
 0.998
BWQ96_02742
Protein translation factor SUI1-like.
   
 0.998
BWQ96_02268
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.998
BWQ96_01341
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.998
BWQ96_01340
40S ribosomal protein S14-3; Belongs to the universal ribosomal protein uS11 family.
  
 0.998
BWQ96_02303
Eukaryotic translation initiation factor 2 subunit beta.
   
 0.997
BWQ96_00652
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.997
BWQ96_03918
Eukaryotic translation initiation factor 3 subunit A.
   
 0.996
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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