STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0012Homologs of previously reported genes of unknown function; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (413 aa)    
Predicted Functional Partners:
sdhD
Succinate dehydrogenase hydrophobic membrane anchor subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
   
    0.772
DWF
7-dehydrocholesterol reductase.
       0.491
LHA_1796
Proton/peptide symporter, POT family protein.
  
   0.480
yvlC
Uncharacterized membrane protein yvlC.
       0.461
dtpB
Dipeptide and tripeptide permease B.
  
   0.460
ydgR
Peptide transport protein, POT family.
  
   0.449
LHA_1280
Homologs of previously reported genes of unknown function.
       0.447
LHA_1159
Di/tripeptide transporter homolog IraB.
  
 
 0.422
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.