STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0095Polyhydroxyalkanoic synthase. (601 aa)    
Predicted Functional Partners:
yfcX
YfcX enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.938
phbB-2
Acetoacetyl-CoA reductase.
  
 
 0.933
phbB
Acetoacetyl-CoA reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator;/product='putative Polyhydroxyalkanoate synthesis repressor PhaR (fragment)'.
  
 
 0.929
LHA_2550
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
 0.918
phaC
Poly(3-hydroxyalkanoate) polymerase.
  
  
 
0.917
LHA_1532
Patatin.
 
   
 0.722
LHA_0661
Homologs of previously reported genes of unknown function.
 
   
 0.599
ackA-2
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 0.554
LHA_0646
Putative patatin-like phospholipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.549
LHA_1495
Putative patatin-like phospholipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   
 0.520
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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