Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LHA_0180 | LHA_0182 | LHA_0180 | LHA_0182 | Iron-sulfur cluster binding protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Protein of unknown function; No homology to any previously reported sequences. | 0.597 |
| LHA_0180 | metG | LHA_0180 | LHA_0179 | Iron-sulfur cluster binding protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.866 |
| LHA_0180 | nth | LHA_0180 | LHA_0181 | Iron-sulfur cluster binding protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.874 |
| LHA_0182 | LHA_0180 | LHA_0182 | LHA_0180 | Protein of unknown function; No homology to any previously reported sequences. | Iron-sulfur cluster binding protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.597 |
| LHA_0182 | metG | LHA_0182 | LHA_0179 | Protein of unknown function; No homology to any previously reported sequences. | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.628 |
| LHA_0182 | nth | LHA_0182 | LHA_0181 | Protein of unknown function; No homology to any previously reported sequences. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.597 |
| LHA_0743 | LHA_0946 | LHA_0743 | LHA_0946 | Methylated-DNA--protein-cysteine methyltransferase. | Protein of unknown function; No homology to any previously reported sequences. | 0.516 |
| LHA_0743 | LHA_1064 | LHA_0743 | LHA_1064 | Methylated-DNA--protein-cysteine methyltransferase. | DNA polymerase III, epsilon subunit; Function of strongly homologous gene; enzyme. | 0.614 |
| LHA_0743 | LHA_2806 | LHA_0743 | LHA_2806 | Methylated-DNA--protein-cysteine methyltransferase. | Exodeoxyribonuclease III. | 0.516 |
| LHA_0743 | mutM | LHA_0743 | LHA_2922 | Methylated-DNA--protein-cysteine methyltransferase. | Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.465 |
| LHA_0743 | nth | LHA_0743 | LHA_0181 | Methylated-DNA--protein-cysteine methyltransferase. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.573 |
| LHA_0743 | polA | LHA_0743 | LHA_0215 | Methylated-DNA--protein-cysteine methyltransferase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.681 |
| LHA_0743 | xhtA | LHA_0743 | LHA_2805 | Methylated-DNA--protein-cysteine methyltransferase. | Endonuclease/exonuclease/phosphatase; Function of strongly homologous gene; enzyme. | 0.516 |
| LHA_0946 | LHA_0743 | LHA_0946 | LHA_0743 | Protein of unknown function; No homology to any previously reported sequences. | Methylated-DNA--protein-cysteine methyltransferase. | 0.516 |
| LHA_0946 | nth | LHA_0946 | LHA_0181 | Protein of unknown function; No homology to any previously reported sequences. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.661 |
| LHA_0946 | polA | LHA_0946 | LHA_0215 | Protein of unknown function; No homology to any previously reported sequences. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.764 |
| LHA_1064 | LHA_0743 | LHA_1064 | LHA_0743 | DNA polymerase III, epsilon subunit; Function of strongly homologous gene; enzyme. | Methylated-DNA--protein-cysteine methyltransferase. | 0.614 |
| LHA_1064 | metG | LHA_1064 | LHA_0179 | DNA polymerase III, epsilon subunit; Function of strongly homologous gene; enzyme. | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.649 |
| LHA_1064 | mutM | LHA_1064 | LHA_2922 | DNA polymerase III, epsilon subunit; Function of strongly homologous gene; enzyme. | Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.885 |
| LHA_1064 | nth | LHA_1064 | LHA_0181 | DNA polymerase III, epsilon subunit; Function of strongly homologous gene; enzyme. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.540 |
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