STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0194Transcriptional regulator, ArsR family. (116 aa)    
Predicted Functional Partners:
LHA_0195
Activator of Hsp90 ATPase 1 family protein; Function of strongly homologous gene; enzyme.
 
  
 0.955
LHA_2609
Putative Aspartate racemase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.675
LHA_1119
Long-chain-fatty-acid--CoA ligase [Beta-ketoacyl synthase active site]; Function of strongly homologous gene; enzyme.
 
   
 0.643
LHA_1995
Beta-ketoacyl synthase (fragment).
 
   
 0.643
LHA_0196
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
  
 0.631
LHA_3013
Homologs of previously reported genes of unknown function.
  
     0.474
LHA_1798
Homologs of previously reported genes of unknown function.
 
    0.456
azoR
FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
     
 0.449
silP
Putative cation-transporting P-type ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.432
LHA_0664
Copper-exporting ATPase; Function of strongly homologous gene.
  
  
 0.432
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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