STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0308Homologs of previously reported genes of unknown function. (177 aa)    
Predicted Functional Partners:
LHA_0309
Homologs of previously reported genes of unknown function.
       0.803
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
     
 0.656
fadE
Acyl-coenzyme A dehydrogenase.
       0.578
LHA_0183
Homologs of previously reported genes of unknown function.
  
     0.471
LHA_2883
Homologs of previously reported genes of unknown function.
  
     0.465
iraA
Small-molecule methyltransferase IraA; Function of strongly homologous gene; enzyme.
  
     0.437
LHA_0311
Protein of unknown function; No homology to any previously reported sequences.
       0.416
LHA_3097
Homologs of previously reported genes of unknown function.
  
     0.410
LHA_2058
Homologs of previously reported genes of unknown function.
  
     0.404
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.