STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcyNL-cystine import ATP-binding protein TcyN. (221 aa)    
Predicted Functional Partners:
glnP
Putative glutamine transport system permease protein glnP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.998
yqiX
Amino acid (Glutamine) ABC transporter, periplasmic amino acid binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.971
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.928
argH
Argininosuccinate lyase.
  
  
 0.902
artJ
Arginine 3rd transport system periplasmic binding protein; Function of strongly homologous gene; transporter.
 
 
 0.819
LHA_2317
Putative amino acid ABC transporter, periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.801
LHA_3143
Putative arginine 3rd transport system periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.799
LHA_1533
Exported protein of unknown function; No homology to any previously reported sequences.
 
 
 0.797
LHA_0378
Putative arginine 3rd transport system periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.796
argR
Putative arginine repressor; Regulates arginine biosynthesis genes.
 
   
 0.789
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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