STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0476Periplasmic component of efflux system. (314 aa)    
Predicted Functional Partners:
LHA_0478
Export ABC transporter permease protein.
 
  
 0.982
LHA_0477
ABC transporter related protein.
  
 0.978
LHA_0474
Putative transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.672
gor
Glutathione reductase.
       0.672
tolC
Outer membrane protein TolC.
  
 
 0.544
LHA_0157
Membrane protein of unknown function; No homology to any previously reported sequences.
 
  
 0.531
LHA_0791
Putative RND efflux system, outer membrane lipoprotein, NodT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.515
LHA_0906
Homologs of previously reported genes of unknown function.
  
 
 0.515
LHA_0068
ABC transporter, permease.
 
  
 0.507
LHA_0159
Putative Efflux transporter, RND family, MFP subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.452
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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