STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0488Homologs of previously reported genes of unknown function. (508 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
  
 0.924
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
  
 0.901
LHA_0827
Homologs of previously reported genes of unknown function.
  
    0.716
LHA_0487
Putative FAD dependent oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.646
nmt
Protein NMT1 homolog.
  
     0.639
LHA_1626
Protein of unknown function [ankyrin domain]; No homology to any previously reported sequences.
  
     0.566
LHA_0490
Homologs of previously reported genes of unknown function; Belongs to the UPF0758 family.
       0.542
LHA_3138
Protein of unknown function; No homology to any previously reported sequences.
  
     0.540
LHA_2439
Putative Redoxin family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.534
hemB
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
  
 0.533
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.