STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0564CBS domain protein. (185 aa)    
Predicted Functional Partners:
silP
Putative cation-transporting P-type ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
   0.630
LHA_0559
Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.594
LHA_0558
Homologs of previously reported genes of unknown function.
  
   0.560
LHA_0563
Homologs of previously reported genes of unknown function.
  
    0.554
LHA_0430
Protein of unknown function; No homology to any previously reported sequences.
  
     0.551
LHA_0565
Protein of unknown function; No homology to any previously reported sequences.
       0.534
cecB
Chemiosmotic efflux system C protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.527
cecC
Chemiosmotic efflux system C protein C.
       0.527
LHA_2945
Homologs of previously reported genes of unknown function.
  
     0.511
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
     
 0.413
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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