Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LHA_0576Homologs of previously reported genes of unknown function. (252 aa)    
Predicted Functional Partners:
sufS
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.743
LHA_1800
Aminotransferase class V.
    
   0.743
LHA_0575
Tropinesterase; Function of strongly homologous gene; enzyme.
       0.738
LHA_1769
Homologs of previously reported genes of unknown function.
   
    0.459
LHA_2794
Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.455
LHA_1064
DNA polymerase III, epsilon subunit; Function of strongly homologous gene; enzyme.
 
     0.429
LHA_0751
Glutamate-cysteine ligase; Function of strongly homologous gene; enzyme.
 
     0.425
rlpB
Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.
  
     0.419
osmY-2
Periplasmic, osmotically inducible protein Y-like.
  
    0.414
pagP
Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.
  
     0.404
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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