STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0578Ferredoxin--NADP reductase; Function of strongly homologous gene; enzyme. (247 aa)    
Predicted Functional Partners:
FBA
Putative fructose-bisphosphate aldolase 2, chloroplastic; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
     
 0.757
dotV
dotV membrane protein of dot/Icm type IV secretion system; Function of strongly homologous gene; membrane component.
       0.610
korA
2-oxoglutarate synthase subunit korA; Function of strongly homologous gene; enzyme.
 
   
 0.595
LHA_2550
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
  
 0.529
msrA
Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.527
LHA_2285
Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
   
 0.518
etfdh
Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial; Accepts electrons from ETF and reduces ubiquinone.
     
 0.512
LHA_1122
Choline monooxygenase; Function of strongly homologous gene; enzyme.
  
  
 0.480
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase protein/.
 
  
 0.477
LHA_2609
Putative Aspartate racemase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
      
 0.474
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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