STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0585Putative PTS IIA-like nitrogen-regulatory protein PtsN; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (156 aa)    
Predicted Functional Partners:
ptsH
Phosphocarrier protein HPr.
 
  
 0.919
yhbH
Ribosome-associated, sigma 54 modulation protein; Function of strongly homologous gene; factor.
 
  
 0.909
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.769
ptsP
Phosphoenolpyruvate-protein phosphotransferase ptsP; Belongs to the PEP-utilizing enzyme family.
  
   
 0.768
LHA_0294
Sigma 54 modulation protein YhbH.
  
  
 0.623
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
  
 0.510
LHA_0584
Homologs of previously reported genes of unknown function.
       0.480
LHA_2550
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
   
  
 0.473
xanB
Xanthan biosynthesis protein xanB [Includes: Mannose-6-phosphate isomerase; Mannose-1-phosphate guanylyl transferase]; Belongs to the mannose-6-phosphate isomerase type 2 family.
     
 0.470
LHA_0589
Protein of unknown function; Doubtful CDS.
       0.452
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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