STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0627Putative integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (317 aa)    
Predicted Functional Partners:
cinA
Competence-damage inducible protein; Function of strongly homologous gene; regulator.
     
 0.809
LHA_0628
Putative MscS mechanosensitive ion channel; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.805
LHA_3200
Putative DNA-binding protein hemimethylated; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
     0.513
LHA_0629
Putative effector protein B (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.507
LHA_2285
Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
    0.490
LHA_2883
Homologs of previously reported genes of unknown function.
  
     0.439
LHA_0479
Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.412
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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