Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LHA_0634D-xylose reductase III. (286 aa)    
Predicted Functional Partners:
LHA_3040
Homologs of previously reported genes of unknown function.
   
    0.843
osmC
Peroxiredoxin osmC.
  
    0.679
LHA_0633
Conserved hypothetical protein with SCP/PR1 domains; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
     
 0.600
LHA_1119
Long-chain-fatty-acid--CoA ligase [Beta-ketoacyl synthase active site]; Function of strongly homologous gene; enzyme.
  
 
 0.594
LHA_1995
Beta-ketoacyl synthase (fragment).
  
 
 0.594
LHA_3083
Putative Pyridoxal 4-dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.534
sodC
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 
 0.499
LHA_1424
Quinone oxidoreductase.
 
 
 0.487
LHA_2469
ThiJ/PfpI.
  
  
 0.476
yqjG
S-transferase; Function of strongly homologous gene; enzyme.
   
  
 0.474
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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