STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0683Putative polysaccharide deacetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (283 aa)    
Predicted Functional Partners:
icmE/dotG
Component of the Dot/Icm secretion system. Major component of a channel; Function of strongly homologous gene; structure.
  
     0.704
LHA_3255
Hyaluronan synthase; Function of strongly homologous gene; enzyme.
  
  
 0.638
LHA_2895
Homologs of previously reported genes of unknown function.
  
     0.626
enhA
Enhanced entry protein EnhA.
  
     0.614
dotA
Component of the Dot/Icm secretion system; Function of strongly homologous gene; membrane component.
  
     0.587
LHA_1417
Putative Enhanced entry protein EnhA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process.
  
     0.585
icmJ
IcmJ protein.
  
     0.579
LHA_2859
Homolog of LvrA protein.
  
     0.578
AnkH
Substrate of the Dot/Icm secretion system [ankyrin repeat]; Function of strongly homologous gene; factor.
  
     0.577
LHA_1849
Putative enhanced entry protein EnhA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.570
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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