Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LHA_0068 | metN | LHA_0068 | LHA_0770 | ABC transporter, permease. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.717 |
| LHA_0478 | metN | LHA_0478 | LHA_0770 | Export ABC transporter permease protein. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.475 |
| LHA_0767 | metI | LHA_0767 | LHA_0769 | Protein of unknown function; No homology to any previously reported sequences. | Putative D-methionine transport system permease protein metI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.485 |
| LHA_0767 | metN | LHA_0767 | LHA_0770 | Protein of unknown function; No homology to any previously reported sequences. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.485 |
| LHA_0767 | metQ | LHA_0767 | LHA_0768 | Protein of unknown function; No homology to any previously reported sequences. | D-methionine-binding lipoprotein metQ. | 0.541 |
| LHA_2083 | LHA_3231 | LHA_2083 | LHA_3231 | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.424 |
| LHA_2083 | metN | LHA_2083 | LHA_0770 | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.467 |
| LHA_3231 | LHA_2083 | LHA_3231 | LHA_2083 | Putative ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.424 |
| LHA_3231 | metN | LHA_3231 | LHA_0770 | Putative ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.454 |
| aprD | metN | LHA_1275 | LHA_0770 | Alkaline protease secretion ATP-binding protein AprD. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.763 |
| metC | metK | LHA_2062 | LHA_0674 | Cystathionine beta-lyase. | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.471 |
| metC | metN | LHA_2062 | LHA_0770 | Cystathionine beta-lyase. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.443 |
| metI | LHA_0767 | LHA_0769 | LHA_0767 | Putative D-methionine transport system permease protein metI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Protein of unknown function; No homology to any previously reported sequences. | 0.485 |
| metI | metN | LHA_0769 | LHA_0770 | Putative D-methionine transport system permease protein metI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.999 |
| metI | metQ | LHA_0769 | LHA_0768 | Putative D-methionine transport system permease protein metI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | D-methionine-binding lipoprotein metQ. | 0.999 |
| metK | metC | LHA_0674 | LHA_2062 | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | Cystathionine beta-lyase. | 0.471 |
| metK | metN | LHA_0674 | LHA_0770 | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.642 |
| metK | metQ | LHA_0674 | LHA_0768 | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | D-methionine-binding lipoprotein metQ. | 0.459 |
| metN | LHA_0068 | LHA_0770 | LHA_0068 | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | ABC transporter, permease. | 0.717 |
| metN | LHA_0478 | LHA_0770 | LHA_0478 | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | Export ABC transporter permease protein. | 0.475 |
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