STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0783Homologs of previously reported genes of unknown function. (104 aa)    
Predicted Functional Partners:
Mccc
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
       0.864
MCCC
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
       0.776
LHA_0781
Putative enoyl-CoA hydratase/isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.776
hmgcll
Putative 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.769
phbA
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.693
IVD
Isovaleryl-CoA dehydrogenase 2, mitochondrial.
       0.688
LHA_0787
Homologs of previously reported genes of unknown function.
       0.620
acsA-2
Acetoacetyl-coenzyme A synthetase [putative SET domain]; Function of strongly homologous gene; enzyme.
       0.618
aguA
Putative agmatine deiminase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.509
speA
Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.
       0.509
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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