STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrKMultidrug resistance protein K. (401 aa)    
Predicted Functional Partners:
LHA_0791
Putative RND efflux system, outer membrane lipoprotein, NodT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.992
LHA_0789
Transporter, major facilitator family.
 
   0.971
LHA_0906
Homologs of previously reported genes of unknown function.
 
 
 0.909
tolC
Outer membrane protein TolC.
 
 
 0.894
LHA_2118
Type I secretion outer membrane protein, TolC family precursor; Function of strongly homologous gene; transporter.
  
 
 0.632
cecC
Chemiosmotic efflux system C protein C.
  
 
 0.613
LHA_0788
Protein of unknown function; No homology to any previously reported sequences.
       0.598
LHA_2564
Putative outer membrane efflux protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
   0.569
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
    0.517
LHA_1029
Conserved membrane protein of unknown function [Fusaric acid resistance protein, conserved region]; Homologs of previously reported genes of unknown function.
 
  
 0.515
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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