STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0791Putative RND efflux system, outer membrane lipoprotein, NodT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (487 aa)    
Predicted Functional Partners:
emrK
Multidrug resistance protein K.
 
 
 0.985
LHA_0789
Transporter, major facilitator family.
 
    0.897
acrA
Acriflavine resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.776
LHA_0907
Homologs of previously reported genes of unknown function; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.771
acrB
Acriflavine resistance protein B.
 
 0.738
LHA_1893
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.706
LHA_2561
Putative multidrug resistance protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.703
bepG
Efflux pump membrane transporter BepG.
 
 0.665
bepG-2
Efflux pump membrane transporter BepG.
 
 0.639
LHA_1028
Putative secretion protein HlyD family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.601
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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