STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0893Homologs of previously reported genes of unknown function. (111 aa)    
Predicted Functional Partners:
LHA_0892
Homologs of previously reported genes of unknown function.
 
  
 0.973
ycf
Putative ATP-dependent transporter ycf16; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.964
LHA_0890
Homologs of previously reported genes of unknown function.
 
   
 0.956
sufB
Component of SufBCD complex; Function of strongly homologous gene; putative transporter.
 
   
 0.951
sufS
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.944
LHA_0887
Rrf2 family protein.
 
   
 0.898
poxA
Lysine--tRNA ligase; Function experimentally demonstrated in the studied species; enzyme.
       0.866
LHA_2201
Putative iron-sulpher cluster proteins NifU; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.788
LHA_2550
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
  
 0.659
LHA_0895
Protein of unknown function; No homology to any previously reported sequences.
       0.588
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.