Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0906Homologs of previously reported genes of unknown function. (517 aa)    
Predicted Functional Partners:
LHA_0907
Homologs of previously reported genes of unknown function; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.980
bepG
Efflux pump membrane transporter BepG.
 
 0.960
emrK
Multidrug resistance protein K.
 
 
 0.909
acrA
Acriflavine resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.845
LHA_1893
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.843
bepG-2
Efflux pump membrane transporter BepG.
 
 0.833
acrB
Acriflavine resistance protein B.
 
 0.827
LHA_2561
Putative multidrug resistance protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.711
LHA_0159
Putative Efflux transporter, RND family, MFP subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.567
LHA_1028
Putative secretion protein HlyD family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.542
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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