STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0911Cyd operon protein YbgT. (39 aa)    
Predicted Functional Partners:
cydA
Cytochrome d ubiquinol oxidase subunit 1.
 
 0.984
LHA_0912
Putative cytochrome oxidase subunit 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.976
cydA-2
Cytochrome D ubiquinol oxidase subunit I.
  
 
 0.771
qxtB
Cytochrome d ubiquinol oxidase subunit 2; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.637
sdhB
Succinate dehydrogenase iron-sulfur subunit.
     
  0.499
sdhA
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
     
  0.499
sdhC
Succinate dehydrogenase cytochrome b556 subunit.
     
  0.499
nuoN
NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.
     
  0.499
nuoM
NADH-quinone oxidoreductase subunit M.
     
  0.499
nuoL
NADH-quinone oxidoreductase subunit L.
     
  0.499
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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