STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_0928Homologs of previously reported genes of unknown function. (429 aa)    
Predicted Functional Partners:
LHA_0927
Homologs of previously reported genes of unknown function.
       0.752
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.716
yqjG
S-transferase; Function of strongly homologous gene; enzyme.
       0.676
LHA_3171
Homologs of previously reported genes of unknown function.
   
    0.588
LHA_2687
Homologs of previously reported genes of unknown function.
  
     0.582
LHA_2837
Uncharacterized protein; Gene remnant;/product='fragment of Integrase/recombinase XerD, putative'.
  
     0.563
pilZ
Type IV pilus assembly PilZ; Function of strongly homologous gene.
  
     0.524
LHA_2164
Putative DamX-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.501
LHA_0930
Ferredoxin 1; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.499
yoaA
Putative ATP-dependent helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.497
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.