Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LHA_1047Homologs of previously reported genes of unknown function; Belongs to the UPF0337 (CsbD) family. (67 aa)    
Predicted Functional Partners:
LHA_1848
Homologs of previously reported genes of unknown function.
 
    0.941
LHA_3076
Exported protein of unknown function; No homology to any previously reported sequences.
 
    0.884
osmY
Osmotically inducible protein.
  
    0.865
LHA_2326
Homologs of previously reported genes of unknown function.
 
    0.831
LHA_1303
Protein with a Dodecin-like topology; Homologs of previously reported genes of unknown function.
   
    0.715
osmC
Peroxiredoxin osmC.
  
  
 0.634
osmY-2
Periplasmic, osmotically inducible protein Y-like.
 
    0.618
LHA_0280
Homologs of previously reported genes of unknown function.
   
    0.589
LHA_3242
Puttaive lipoproteins.
  
    0.546
LHA_3243
Periplasmic protein.
  
    0.546
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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