STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_1047Homologs of previously reported genes of unknown function; Belongs to the UPF0337 (CsbD) family. (67 aa)    
Predicted Functional Partners:
LHA_1848
Homologs of previously reported genes of unknown function.
 
  
 0.937
LHA_3076
Exported protein of unknown function; No homology to any previously reported sequences.
 
  
 0.840
osmY
Osmotically inducible protein.
  
  
 0.815
LHA_2326
Homologs of previously reported genes of unknown function.
 
  
 0.811
LHA_1303
Protein with a Dodecin-like topology; Homologs of previously reported genes of unknown function.
   
    0.669
osmC
Peroxiredoxin osmC.
  
  
 0.618
osmY-2
Periplasmic, osmotically inducible protein Y-like.
 
    0.601
LHA_0280
Homologs of previously reported genes of unknown function.
   
    0.544
LHA_0896
Nucleoside-diphosphate sugar epimerase.
   
    0.544
LHA_3242
Puttaive lipoproteins.
  
    0.526
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.