STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_1167Similar to Nucleotidyl transferase. (356 aa)    
Predicted Functional Partners:
LHA_1169
CMP-N-acetylneuraminic acid synthetase.
 
  
 0.949
LHA_1162
NAD-dependent epimerase/dehydratase.
 
 
 0.942
LHA_1165
Sialic acid synthase.
 
  
 0.932
LHA_1164
UDP-N-acetylglucosamine 2-epimerase.
 
 
 
 0.921
LHA_1163
Putative aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.919
LHA_1171
Homologs of previously reported genes of unknown function.
 
    0.899
rpsB
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
  
   0.894
LHA_1170
Flagellin modification protein A.
 
 
 0.873
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
   
   0.869
LHA_1166
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
     0.868
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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