STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_1192Protein of unknown function; No homology to any previously reported sequences. (326 aa)    
Predicted Functional Partners:
epsL
Uncharacterized sugar transferase epsL.
  
  
 0.767
LHA_1188
Glycosyl transferase, group 4 family protein.
  
  
 0.752
LHA_1191
Putative aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.698
LHA_1190
Trimeric LpxA-like family protein.
       0.636
LHA_1193
Membrane protein of unknown function; No homology to any previously reported sequences.
       0.592
LHA_1186
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.575
LHA_1194
Glycosyl transferases group 1-like protein; Function of strongly homologous gene; enzyme.
  
  
 0.475
galE
UDP-glucose 4-epimerase.
  
  
 0.473
rmlD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
  
 0.459
LHA_1183
Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.455
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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