STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_1203Membrane protein of unknown function; No homology to any previously reported sequences. (423 aa)    
Predicted Functional Partners:
rmlB
dTDP-glucose 4,6 dehydratase, NAD(P)-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.959
rmlA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.959
rffA
Lipopolysaccharide biosynthesis protein rffA; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.881
epsL
Uncharacterized sugar transferase epsL.
  
  
 0.876
LHA_1204
Protein of unknown function; No homology to any previously reported sequences.
  
  
 0.823
udg
UDP-glucose 6-dehydrogenase.
  
  
 0.820
pagP
Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.
  
     0.563
LHA_1440
Homologs of previously reported genes of unknown function.
  
   
 0.562
pimF
Putative glycosyltransferases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.558
LHA_1199
Putative transmembrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.531
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.