STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hbpABacterial extracellular solute-binding protein. (721 aa)    
Predicted Functional Partners:
LHA_1265
Peptide ABC transporter, permease protein.
 
 
 0.993
LHA_1266
Peptide ABC transporter, permease protein.
 
 
 0.990
korA
2-oxoglutarate synthase subunit korA; Function of strongly homologous gene; enzyme.
  
    0.854
dppD
Nickel-transporting ATPase; Function of strongly homologous gene; enzyme; Belongs to the ABC transporter superfamily.
 
  
 0.745
ligA
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
  
  
 0.684
LHA_0596
Homologs of previously reported genes of unknown function.
  
     0.589
LHA_1267
Protein of unknown function; No homology to any previously reported sequences.
       0.497
rmuC
RmuC family protein; Function of strongly homologous gene; cell process.
     
 0.478
glnP
Putative glutamine transport system permease protein glnP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 
 0.463
LHA_1261
Homologs of previously reported genes of unknown function.
       0.453
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.