Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LHA_0455 | LHA_3014 | LHA_0455 | LHA_3014 | Putative Uridine-cytidine kinase B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Homologs of previously reported genes of unknown function. | 0.923 |
| LHA_0455 | pyrF | LHA_0455 | LHA_1874 | Putative Uridine-cytidine kinase B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.912 |
| LHA_0455 | pyrH | LHA_0455 | LHA_1444 | Putative Uridine-cytidine kinase B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.923 |
| LHA_0455 | surE | LHA_0455 | LHA_1938 | Putative Uridine-cytidine kinase B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 5'-nucleotidase surE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.905 |
| LHA_0455 | udk | LHA_0455 | LHA_0720 | Putative Uridine-cytidine kinase B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Uridine kinase. | 0.925 |
| LHA_0455 | yjjG | LHA_0455 | LHA_1014 | Putative Uridine-cytidine kinase B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | dUMP phosphatase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.915 |
| LHA_3014 | LHA_0455 | LHA_3014 | LHA_0455 | Homologs of previously reported genes of unknown function. | Putative Uridine-cytidine kinase B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.923 |
| LHA_3014 | pyrF | LHA_3014 | LHA_1874 | Homologs of previously reported genes of unknown function. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.912 |
| LHA_3014 | pyrH | LHA_3014 | LHA_1444 | Homologs of previously reported genes of unknown function. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.916 |
| LHA_3014 | surE | LHA_3014 | LHA_1938 | Homologs of previously reported genes of unknown function. | 5'-nucleotidase surE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.903 |
| LHA_3014 | udk | LHA_3014 | LHA_0720 | Homologs of previously reported genes of unknown function. | Uridine kinase. | 0.925 |
| LHA_3014 | yjjG | LHA_3014 | LHA_1014 | Homologs of previously reported genes of unknown function. | dUMP phosphatase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.918 |
| frr | ndk | LHA_1445 | LHA_1586 | Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.810 |
| frr | pyrH | LHA_1445 | LHA_1444 | Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.990 |
| frr | rpsB | LHA_1445 | LHA_1442 | Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.998 |
| frr | tsf | LHA_1445 | LHA_1443 | Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.993 |
| ndk | frr | LHA_1586 | LHA_1445 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.810 |
| ndk | pyrH | LHA_1586 | LHA_1444 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.941 |
| ndk | rpsB | LHA_1586 | LHA_1442 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.995 |
| ndk | tsf | LHA_1586 | LHA_1443 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.578 |
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