Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHA_1626Protein of unknown function [ankyrin domain]; No homology to any previously reported sequences. (789 aa)    
Predicted Functional Partners:
LHA_1995
Beta-ketoacyl synthase (fragment).
 
 0.856
LHA_1119
Long-chain-fatty-acid--CoA ligase [Beta-ketoacyl synthase active site]; Function of strongly homologous gene; enzyme.
 
 0.855
LHA_2597
Protein of unknown function [coiled-coil domain]; No homology to any previously reported sequences.
   
 0.810
LHA_1268
Protein of unknown function [ankyrin repeat]; No homology to any previously reported sequences.
  
     0.766
LHA_0686
Protein of unknown function [ankyrin repeat]; No homology to any previously reported sequences.
  
     0.723
LHA_0385
Protein of unknown function [ankyrin repeat]; No homology to any previously reported sequences.
  
     0.673
LHA_3020
Protein of unknown function [ankyrin domain]; No homology to any previously reported sequences.
  
     0.654
LHA_1695
Protein of unknown function [ankyrin repeat]; No homology to any previously reported sequences.
  
     0.619
LHA_0160
Protein of unknown function [ankyrin and F-box domain]; No homology to any previously reported sequences.
  
     0.613
LHA_1431
Protein of unknown function [SET domain]; No homology to any previously reported sequences.
  
 
  0.574
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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