STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_1689Sphingosine-1-phosphate lyase; Function of strongly homologous gene; enzyme. (622 aa)    
Predicted Functional Partners:
LHA_2947
Serine/threonine-protein kinase; Function of strongly homologous gene; enzyme.
  
     0.702
LHA_2338
Endo-1,3(4)-beta-glucanase; Function of strongly homologous gene; enzyme.
  
     0.701
LHA_0385
Protein of unknown function [ankyrin repeat]; No homology to any previously reported sequences.
  
 
   0.628
LHA_1119
Long-chain-fatty-acid--CoA ligase [Beta-ketoacyl synthase active site]; Function of strongly homologous gene; enzyme.
 
  
 0.626
LHA_2357
Exported protein of unknown function; No homology to any previously reported sequences.
 
     0.615
LHA_0998
Membrane protein of unknown function; No homology to any previously reported sequences.
  
 
 
 0.578
LHA_1995
Beta-ketoacyl synthase (fragment).
  
  
 0.577
LHA_2609
Putative Aspartate racemase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.572
LHA_2693
Protein of unknown function; No homology to any previously reported sequences.
  
 
 
 0.569
gabT
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.547
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.