STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_1751Putative Xenobiotic-transporting ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (866 aa)    
Predicted Functional Partners:
LHA_1749
Membrane-fusion protein [coiled-coil domain]; Gene remnant;/product='fragment of protein of unknown function'.
 
 
 0.972
SunT
Xenobiotic-transporting ATPase; Function of strongly homologous gene; enzyme.
 
    
0.861
LHA_1752
Cation diffusion facilitator family transporter; Function of strongly homologous gene; transporter.
       0.648
LHA_3232
Putative HlyD family secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.579
LHA_1274
Type I secretion membrane fusion protein, HlyD; Function of strongly homologous gene; transporter.
 
 
 0.524
LHA_1524
Exported protein of unknown function; No homology to any previously reported sequences.
 
  
 0.480
LHA_2083
Putative ABC transporter ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
  
0.467
msbA
Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
 
  
0.464
abcT-2
ABC transporter ATP binding protein.
 
 
  
0.454
lssD
Legionella secretion system protein D.
  
 
 0.450
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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