Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LHA_1857Protein of unknown function; No homology to any previously reported sequences. (152 aa)    
Predicted Functional Partners:
ybeZ
Putative enzyme with nucleoside triphosphate hydrolase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.726
ybeY
Putative metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.720
ybeX
Putative protein involved in divalent ion export; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.720
cpxR
Transcriptional regulatory protein CpxR.
       0.521
cpxA
Sensor histidine kinase CpxA.
       0.475
LHA_1856
Homologs of previously reported genes of unknown function.
       0.445
LHA_1855
Polymerase and histidinol phosphatase-like; Function of strongly homologous gene; enzyme.
       0.424
LHA_1854
Translation factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor; Belongs to the SUA5 family.
       0.421
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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