Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LHA_1845 | LHA_1927 | LHA_1845 | LHA_1927 | Conserved protein of unknown function; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Homologs of previously reported genes of unknown function. | 0.774 |
| LHA_1845 | flgG | LHA_1845 | LHA_2033 | Conserved protein of unknown function; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar basal-body rod protein flgG; Belongs to the flagella basal body rod proteins family. | 0.971 |
| LHA_1845 | fliE | LHA_1845 | LHA_2218 | Conserved protein of unknown function; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-basal body complex protein fliE. | 0.982 |
| LHA_1845 | fliI | LHA_1845 | LHA_2214 | Conserved protein of unknown function; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellum-specific ATP synthase. | 0.966 |
| LHA_1845 | fliM | LHA_1845 | LHA_2262 | Conserved protein of unknown function; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.980 |
| LHA_1927 | LHA_1845 | LHA_1927 | LHA_1845 | Homologs of previously reported genes of unknown function. | Conserved protein of unknown function; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.774 |
| LHA_1927 | LHA_2789 | LHA_1927 | LHA_2789 | Homologs of previously reported genes of unknown function. | Peptidase, M23/M37 family. | 0.617 |
| LHA_1927 | amiC | LHA_1927 | LHA_2730 | Homologs of previously reported genes of unknown function. | N-acetylmuramoyl-L-alanine amidase. | 0.635 |
| LHA_1927 | flgG | LHA_1927 | LHA_2033 | Homologs of previously reported genes of unknown function. | Flagellar basal-body rod protein flgG; Belongs to the flagella basal body rod proteins family. | 0.884 |
| LHA_1927 | fliE | LHA_1927 | LHA_2218 | Homologs of previously reported genes of unknown function. | Flagellar hook-basal body complex protein fliE. | 0.729 |
| LHA_1927 | fliI | LHA_1927 | LHA_2214 | Homologs of previously reported genes of unknown function. | Flagellum-specific ATP synthase. | 0.699 |
| LHA_1927 | fliM | LHA_1927 | LHA_2262 | Homologs of previously reported genes of unknown function. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.651 |
| LHA_1927 | icmE/dotG | LHA_1927 | LHA_2389 | Homologs of previously reported genes of unknown function. | Component of the Dot/Icm secretion system. Major component of a channel; Function of strongly homologous gene; structure. | 0.956 |
| LHA_1927 | ispZ | LHA_1927 | LHA_1928 | Homologs of previously reported genes of unknown function. | Putative intracellular septation protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. | 0.617 |
| LHA_1927 | rlpA-2 | LHA_1927 | LHA_2482 | Homologs of previously reported genes of unknown function. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.692 |
| LHA_2789 | LHA_1927 | LHA_2789 | LHA_1927 | Peptidase, M23/M37 family. | Homologs of previously reported genes of unknown function. | 0.617 |
| LHA_2789 | amiC | LHA_2789 | LHA_2730 | Peptidase, M23/M37 family. | N-acetylmuramoyl-L-alanine amidase. | 0.671 |
| LHA_2789 | rlpA-2 | LHA_2789 | LHA_2482 | Peptidase, M23/M37 family. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.475 |
| amiC | LHA_1927 | LHA_2730 | LHA_1927 | N-acetylmuramoyl-L-alanine amidase. | Homologs of previously reported genes of unknown function. | 0.635 |
| amiC | LHA_2789 | LHA_2730 | LHA_2789 | N-acetylmuramoyl-L-alanine amidase. | Peptidase, M23/M37 family. | 0.671 |
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