STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_1980Sulfate transporter, CysZ-type; Function of strongly homologous gene; transporter. (254 aa)    
Predicted Functional Partners:
LHA_1979
Homologs of previously reported genes of unknown function.
 
     0.648
LHA_1978
RES domain protein; Homologs of previously reported genes of unknown function.
       0.601
fis-2
DNA-binding protein fis; Belongs to the transcriptional regulatory Fis family.
  
     0.514
truD
tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.
  
     0.496
LHA_2168
Protein of unknown function; No homology to any previously reported sequences.
  
     0.492
recF
DNA replication and repair protein recF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.
  
     0.487
LHA_0105
Homologs of previously reported genes of unknown function.
  
     0.471
sspA
Stringent starvation protein A; Belongs to the GST superfamily.
  
     0.458
LHA_0060
Homologs of previously reported genes of unknown function; Belongs to the UPF0149 family.
  
     0.443
LHA_1981
Glyoxalase/bleomycin resistance protein/dioxygenase; Function of strongly homologous gene; enzyme.
       0.442
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.