STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHA_2019Putative RNA-directed DNA polymerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (507 aa)    
Predicted Functional Partners:
LHA_2020
Restriction modification system, type I.
  
    0.811
LHA_2018
Putative type I restriction enzyme HindVIIP R protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.792
LHA_2022
Putative type I restriction enzyme HindVIIP M protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.789
LHA_2017
Uncharacterized protein; Function of strongly homologous gene; putative enzyme;/product='putative helicase (fragment)'.
       0.773
LHA_2021
Homologs of previously reported genes of unknown function.
       0.773
LHA_2023
Putative phage protein (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
       0.773
capD
UDP-glucose 4-epimerase.
   
    0.545
capD-2
Capsular polysaccharide biosynthesis protein CapD.
   
    0.545
LHA_2024
Putative AAA ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.428
LHA_2025
Homologs of previously reported genes of unknown function.
       0.428
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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