STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capD-2Capsular polysaccharide biosynthesis protein CapD. (626 aa)    
Predicted Functional Partners:
xanB
Xanthan biosynthesis protein xanB [Includes: Mannose-6-phosphate isomerase; Mannose-1-phosphate guanylyl transferase]; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.904
epsL
Uncharacterized sugar transferase epsL.
 
  
 0.904
flgI
Flagellar basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.694
csaA
Protein CsaA.
       0.684
LHA_2086
Putative cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.678
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
    0.653
LHA_1191
Putative aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.621
degT
Pleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.609
LHA_1163
Putative aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.606
LHA_2088
Homologs of previously reported genes of unknown function.
       0.597
Your Current Organism:
Legionella hackeliae
NCBI taxonomy Id: 449
Other names: ATCC 35250, CCUG 31232, CCUG 31232 A, CIP 103844, DSM 19214, JCM 7563, L. hackeliae, NCTC 11979, strain Lansing 2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.